bibliometrix - Comprehensive Science Mapping Analysis
Tool for quantitative research in scientometrics and bibliometrics. It implements the comprehensive workflow for science mapping analysis proposed in Aria M. and Cuccurullo C. (2017) <doi:10.1016/j.joi.2017.08.007>. 'bibliometrix' provides various routines for importing bibliographic data from 'SCOPUS', 'Clarivate Analytics Web of Science' (<https://www.webofknowledge.com/>), 'Digital Science Dimensions' (<https://www.dimensions.ai/>), 'OpenAlex' (<https://openalex.org/>), 'Cochrane Library' (<https://www.cochranelibrary.com/>), 'Lens' (<https://lens.org>), and 'PubMed' (<https://pubmed.ncbi.nlm.nih.gov/>) databases, performing bibliometric analysis and building networks for co-citation, coupling, scientific collaboration and co-word analysis.
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bibliometric-analysisbibliometricscitationcitation-networkcitationsco-authorsco-occurenceco-word-analysiscorrespondence-analysiscouplingisi-webjournalmanuscriptquantitative-analysisscholarssciencescience-mappingscientificscientometricsscopus
12.67 score 642 stars 1 dependents 716 scripts 38k downloads
openalexR - Getting Bibliographic Records from 'OpenAlex' Database Using 'DSL' API
A set of tools to extract bibliographic content from 'OpenAlex' database using API <https://developers.openalex.org/>.
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bibliographic-databibliographic-databasebibliometricsbibliometrixscience-mapping
10.84 score 142 stars 7 dependents 446 scripts 13k downloadspubmedR - Gathering Metadata About Publications, Grants, Clinical Trials from 'PubMed' Database
A set of tools to extract bibliographic content from 'PubMed' database using 'NCBI' REST API <https://www.ncbi.nlm.nih.gov/home/develop/api/>. It includes functions to search, download, and convert 'PubMed' bibliographic records into data frames compatible with the 'bibliometrix' package. Features include programmatic query building, batch downloading by PMID, citation enrichment via 'NCBI' E-Link, and robust error handling with automatic retry logic.
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8.72 score 46 stars 2 dependents 68 scripts 14k downloadscontentanalysis - Scientific Content and Citation Analysis from PDF Documents
Provides comprehensive tools for extracting and analyzing scientific content from PDF documents, including citation extraction, reference matching, text analysis, and bibliometric indicators. Supports multi-column PDF layouts, 'CrossRef' API <https://www.crossref.org/documentation/retrieve-metadata/rest-api/> integration, and advanced citation parsing.
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7.54 score 2 stars 2 dependents 22 scripts 18k downloadsdimensionsR - Gathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API
A set of tools to extract bibliographic content from 'Digital Science Dimensions' using 'DSL' API <https://www.dimensions.ai/dimensions-apis/>.
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bibliographic-databasebibliographybibliometricsbibliometrixclinical-trialsds-dimensionsdsl-apigathering-bibliographic-recordsgrantgrantsgrants-searchpatentspolicy-documentspublicationspublications-search
7.21 score 47 stars 2 dependents 11 scripts 10k downloadse2tree - Explainable Ensemble Trees
The Explainable Ensemble Trees 'e2tree' approach has been proposed by Aria et al. (2024) <doi:10.1007/s00180-022-01312-6>. It aims to explain and interpret decision tree ensemble models using a single tree-like structure. 'e2tree' is a new way of explaining an ensemble tree trained through 'randomForest' or 'xgboost' packages.
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explainable-machine-learningcppopenmp
6.26 score 8 stars 19 scripts 470 downloadstall - Text Analysis for All
An R 'shiny' app designed for diverse text analysis tasks, offering a wide range of methodologies tailored to Natural Language Processing (NLP) needs. It is a versatile, general-purpose tool for analyzing textual data. 'tall' features a comprehensive workflow, including data cleaning, preprocessing, statistical analysis, and visualization, all integrated for effective text analysis.
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r-shinytext-analysis-and-sentiment-analysistext-classificationtext-miningtextual-analysiscpp
5.71 score 39 stars 9 scripts 643 downloadsbibliometrixData - Bibliometrix Example Datasets
It contains some example datasets used in 'bibliometrix'. The data are bibliographic datasets exported from the 'SCOPUS' (<https://scopus.com>) and 'Clarivate Analytics Web of Science' (<https://www.webofscience.com/>) databases. They can be used to test the different features of the package 'bibliometrix' (<https://bibliometrix.org>).
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5.28 score 5 stars 2 dependents 11 scripts 12k downloads